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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs112472626 chr2:29036679 A/G 9.62E-5 489 15.9 17.08 14.98 KM Plot
THCA rs112504471 chr6:86775405 G/A 1.03E-14 481 15.07 18.33 11.42 KM Plot
THCA rs112507051 chr10:104648466 C/T 5.6E-9 488 15.3 17.63 32.1 KM Plot
THCA rs112508191 chr1:224368372 GC/G 9.87E-5 482 16.63 15.17 12.43 KM Plot
THCA rs112523342 chr21:37431855 A/G 3.09E-5 488 16.65 13.2 12.82 KM Plot
THCA rs1125645 chr14:36094281 T/C 5.97E-6 483 15.93 16.07 8.33 KM Plot
THCA rs112574306 chr10:104971159 C/T 2.51E-7 477 15.27 17.85 10.17 KM Plot
THCA rs112600952 chr1:220709959 G/A 2.65E-5 484 15.87 16.93 17.17 KM Plot
THCA rs112605338 chr10:7847701 C/T 9.8E-11 484 15.7 16.6 17.77 KM Plot
THCA rs112611466 chr12:131365662 G/GGT 0.000158 483 16.27 14.97 15.9 KM Plot
THCA rs112628241 chr2:47591769 C/G 1.75E-14 476 15.87 16.3 14.32 KM Plot
THCA rs112643438 chr2:48055558 C/A 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs11264583 chr1:156888690 A/G 6.73E-7 480 16.63 14.87 11.3 KM Plot
THCA rs11264584 chr1:156899288 G/A 6.99E-7 479 16.63 14.8 11.3 KM Plot
THCA rs11264607 chr1:157029199 A/G 1.77E-7 479 16.65 15.17 11.98 KM Plot